How to align bar lines of project window and editor window

If you are referring to the Key Editor in the Project Window’s Lower Zone, then activate the button in the Lower Zone labeled “Link Project and Lower Zone Editor Cursors” - it looks like 2 links in a chain. If you can’t see the button use the gear configuration button to make it visible.

If you want to align the Key Editor in its own floating Window & the Project Window, you can’t. They are totally independant of each other and can be different sizes and shapes